STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX2RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (376 aa)    
Predicted Functional Partners:
LOC102740119
RNA-binding protein 38-like.
  
 
 0.797
RBM24
RNA-binding protein 24.
  
 
 0.792
PTBP2
Polypyrimidine tract-binding protein 2 isoform X2.
    
 
 0.713
PTBP1
Polypyrimidine tract-binding protein 1 isoform X1.
    
 
 0.691
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X1.
     
 0.678
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.617
ESRP2
Epithelial splicing regulatory protein 2.
     
 0.613
HMGXB4
HMG domain-containing protein 4 isoform X1.
      
 0.596
SRSF2
Serine/arginine-rich splicing factor 2 isoform X1.
  
  
0.567
TRERF1
Transcriptional-regulating factor 1 isoform X1.
      
 0.563
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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