STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPAS1Neuronal PAS domain-containing protein 1 isoform X1. (593 aa)    
Predicted Functional Partners:
ARNT
Aryl hydrocarbon receptor nuclear translocator isoform X1.
    
0.999
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
0.890
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 0.802
CAB39L
Calcium-binding protein 39-like isoform X2.
   
    0.766
TCEB1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.714
EGLN1
Egl nine homolog 1.
    
 0.710
EGLN2
Egl nine homolog 2-like.
    
 0.710
LOC102748129
Egl nine homolog 3-like.
    
 0.710
LHX6
LIM/homeobox protein Lhx6 isoform X2.
    
 
 0.663
GBX1
Homeobox protein GBX-1.
      
 0.625
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.