STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM196BProtein FAM196B. (495 aa)    
Predicted Functional Partners:
LYPD6
ly6/PLAUR domain-containing protein 6.
    
 0.728
EGFL6
Epidermal growth factor-like protein 6.
    
 0.588
LOC102739551
Uncharacterized protein C6orf132 homolog.
    
 0.552
TMEM72
Transmembrane protein 72.
      
 0.543
TTC9
Tetratricopeptide repeat protein 9A.
    
 
 0.493
MARCH7
E3 ubiquitin-protein ligase MARCH7.
  
     0.492
GOLIM4
Golgi integral membrane protein 4-like.
      
 0.489
FOXL2
Forkhead box protein L2.
    
 
 0.428
NYNRIN
Protein NYNRIN.
  
 
 0.416
RBM6
RNA-binding protein 6 isoform X1.
  
     0.401
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.