STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102745103DNA-binding protein Ikaros-like. (328 aa)    
Predicted Functional Partners:
LOC102731636
Zinc finger protein Aiolos-like isoform X1.
  
 
0.747
CHD4
chromodomain-helicase-DNA-binding protein 4 isoform X2.
   
 0.641
PTCRA
Pre T-cell antigen receptor alpha.
     
 0.597
RBX1
E3 ubiquitin-protein ligase RBX1 isoform X3.
   
 
 0.593
IRF4
Interferon regulatory factor 4 isoform X1.
   
 0.567
IKZF4
Zinc finger protein Eos isoform X1.
   
  
0.554
PHF6
PHD finger protein 6 isoform X1.
  
 0.550
LOC102748045
Proto-oncogene vav-like.
   
  
 0.540
ZMYM2
Zinc finger MYM-type protein 2.
    
 0.516
PAX5
Paired box protein Pax-5 isoform X1.
   
  
 0.503
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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