STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102741544Zinc finger protein GLI4-like. (215 aa)    
Predicted Functional Partners:
LOC102733950
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like.
    
 0.610
CAMK2N1
Calcium/calmodulin-dependent protein kinase II inhibitor 1.
      
 0.487
ATXN1
Ataxin-1.
    
 
 0.484
TSNAX
Translin-associated protein X.
      
 0.451
CAPN8
LOW QUALITY PROTEIN: calpain 8; Belongs to the peptidase C2 family.
   
 0.448
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.