STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102727675Decorin; May affect the rate of fibrils formation. (360 aa)    
Predicted Functional Partners:
TGFB1
Transforming growth factor beta-1.
    
 0.979
LUM
Lumican.
  
  
0.941
SPARC
SPARC isoform X2.
   
  
 0.937
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.937
MMP14
Matrix metalloproteinase-14.
     
 0.931
LOC102726566
Fibrillin-1-like.
   
 0.930
COL1A2
Collagen alpha-2(I) chain.
   
 
 0.927
ERBB3
Receptor tyrosine-protein kinase erbB-3.
    
 0.923
LOC102740569
Transmembrane protease serine 6-like.
    
 0.918
LOC102737030
Receptor tyrosine-protein kinase erbB-2-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.917
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.