STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102749632Krueppel-like factor 4-like. (414 aa)    
Predicted Functional Partners:
NFKB1
Nuclear factor NF-kappa-B p105 subunit.
    
 0.806
NANOG
Homeobox protein NANOG.
    
 0.767
ESRRB
Steroid hormone receptor ERR2.
    
 0.598
SOX17
Transcription factor SOX-17-like.
    
 0.583
POU5F1
POU domain protein.
    
 0.559
POU5F2
POU domain protein.
    
 0.559
TFCP2L1
Transcription factor CP2-like protein 1.
    
 
 0.547
CCM2
Malcavernin.
   
 0.538
LIN28A
Protein lin-28 homolog A.
    
 0.503
LOC102745156
Catenin beta-1-like isoform X1.
    
 0.498
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.