STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008421tRNA-synt_1e domain-containing protein. (875 aa)    
Predicted Functional Partners:
DFL_002332
Uncharacterized protein.
   
 0.956
DFL_004767
Uncharacterized protein.
  
 
 0.906
DFL_006625
Uncharacterized protein.
  
 
 0.865
DFL_006804
Tryptophan synthase.
  
 
 0.862
DFL_001112
Uncharacterized protein.
   
 
 0.838
DFL_007721
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.836
DFL_001474
Hcy-binding domain-containing protein.
    
  0.810
DFL_004760
Triosephosphate isomerase.
 
 
  
 0.807
DFL_007659
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.805
DFL_008792
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.793
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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