STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_009497Uncharacterized protein. (476 aa)    
Predicted Functional Partners:
DFL_007274
Uncharacterized protein.
    
 0.988
DFL_007689
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.982
DFL_006690
Uncharacterized protein.
    
 0.948
DFL_005568
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.889
DFL_003504
Uncharacterized protein.
    
 0.884
DFL_006100
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.880
DFL_001034
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.862
DFL_000732
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.855
DFL_002779
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 
  0.849
DFL_000360
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
     
 0.828
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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