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CAPN10 protein (Tursiops truncatus) - STRING interaction network
"CAPN10" - Calpain 10 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN10Calpain 10 (697 aa)    
Predicted Functional Partners:
PTPN23
Protein tyrosine phosphatase, non-receptor type 23 (1627 aa)
       
  0.654
CHMP4B
Charged multivesicular body protein 4B (160 aa)
     
 
  0.595
CHMP4A
Charged multivesicular body protein 4A (244 aa)
     
 
  0.595
CHMP4C
Charged multivesicular body protein 4C (237 aa)
     
 
  0.595
PEF1
penta-EF-hand domain containing 1 (290 aa)
       
  0.576
GCA
Grancalcin, EF-hand calcium binding protein (180 aa)
       
  0.576
CAPNS1
Calpain, small subunit 1 (266 aa)
 
   
  0.576
SRI
Sorcin (181 aa)
 
   
  0.576
RHPN2
Rhophilin, Rho GTPase binding protein 2 (688 aa)
       
 
  0.511
RHPN1
Rhophilin, Rho GTPase binding protein 1 (658 aa)
       
 
  0.511
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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