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RNF20 protein (Tursiops truncatus) - STRING interaction network
"RNF20" - Ring finger protein 20, E3 ubiquitin protein ligase in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF20Ring finger protein 20, E3 ubiquitin protein ligase (977 aa)    
Predicted Functional Partners:
UBE2B
Ubiquitin-conjugating enzyme E2B (152 aa)
     
 
  0.914
UBE2A
Ubiquitin-conjugating enzyme E2A (150 aa)
     
 
  0.914
UBE2U
Ubiquitin-conjugating enzyme E2U (putative) (320 aa)
     
 
  0.914
PAF1
Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (526 aa)
     
 
  0.700
SETD1B
SET domain containing 1B (742 aa)
     
 
  0.648
SETD1A
SET domain containing 1A (1694 aa)
     
 
  0.648
MYH7B
Myosin, heavy chain 7B, cardiac muscle, beta (1977 aa)
     
 
  0.642
LEO1
Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (666 aa)
     
   
  0.623
CTR9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (1173 aa)
     
 
  0.620
SETD2
SET domain containing 2 (2054 aa)
     
 
  0.611
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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