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SMC1B protein (Tursiops truncatus) - STRING interaction network
"SMC1B" - Structural maintenance of chromosomes 1B in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1BStructural maintenance of chromosomes 1B (1197 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3 (1215 aa)
     
0.998
RAD21
RAD21 homolog (S. pombe) (630 aa)
     
  0.996
STAG1
Stromal antigen 1 (1258 aa)
     
  0.992
STAG2
Stromal antigen 2 (1268 aa)
     
  0.992
STAG3
Stromal antigen 3 (1220 aa)
     
  0.988
ESPL1
Extra spindle pole bodies homolog 1 (S. cerevisiae) (2106 aa)
     
  0.982
REC8
REC8 homolog (yeast) (546 aa)
     
  0.970
SMC4
Structural maintenance of chromosomes 4 (1278 aa)
     
 
0.954
NIPBL
Nipped-B homolog (Drosophila) (2801 aa)
     
  0.952
TOP2A
Topoisomerase (DNA) II alpha 170kDa (1502 aa)
     
 
  0.950
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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