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COL25A1 protein (Tursiops truncatus) - STRING interaction network
"COL25A1" - Collagen, type XXV, alpha 1 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL25A1Collagen, type XXV, alpha 1 (646 aa)    
Predicted Functional Partners:
DST
Dystonin (7528 aa)
       
  0.744
RPL5
Ribosomal protein L5 (296 aa)
           
  0.538
CRB2
Crumbs homolog 2 (Drosophila) (1254 aa)
     
  0.529
DLK2
Delta-like 2 homolog (Drosophila) (383 aa)
     
  0.529
NTNG1
Netrin G1 (538 aa)
     
  0.516
C1QB
Complement component 1, q subcomponent, B chain (253 aa)
   
          0.508
MYO5B
Myosin VB (1835 aa)
     
   
  0.507
FRAS1
Fraser syndrome 1 (3980 aa)
       
  0.479
PLEC
Plectin (4664 aa)
       
  0.467
LRIT1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 (622 aa)
       
  0.466
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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