STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FYCO1FYVE and coiled-coil domain-containing protein 1. (1463 aa)    
Predicted Functional Partners:
RAB7A
Ras-related protein Rab-7a.
    
 0.945
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 
 0.789
ENSTTRP00000011827
annotation not available
   
 
 0.789
STARD3NL
MLN64 N-terminal domain homolog.
      
 0.759
LZTFL1
Leucine zipper transcription factor-like protein 1.
 
    
 0.743
STARD3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
      
 0.728
ARL8A
ADP ribosylation factor like GTPase 8A.
    
 0.697
ARL8B
LOW QUALITY PROTEIN: ADP-ribosylation factor-like protein 8B; Belongs to the small GTPase superfamily. Arf family.
    
 0.697
PLEKHM1
Pleckstrin homology and RUN domain containing M1.
    
 
 0.696
SLC6A20
Solute carrier family 6 member 20.
      
 0.687
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.