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COL8A1 protein (Tursiops truncatus) - STRING interaction network
"COL8A1" - Collagen, type VIII, alpha 1 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL8A1Collagen, type VIII, alpha 1 (738 aa)    
Predicted Functional Partners:
COL22A1
Collagen, type XXII, alpha 1 (1625 aa)
         
0.839
COL11A2
Collagen, type XI, alpha 2 (1736 aa)
   
 
0.638
COL8A2
Collagen, type VIII, alpha 2 (705 aa)
     
0.635
COL9A1
Collagen, type IX, alpha 1 (920 aa)
   
 
  0.634
COL10A1
Collagen, type X, alpha 1 (614 aa)
   
   
0.586
COL5A1
Collagen, type V, alpha 1 (1839 aa)
     
 
0.559
COL11A1
Collagen, type XI, alpha 1 (1780 aa)
     
 
0.558
COL4A5
Collagen, type IV, alpha 5 (1690 aa)
     
 
0.553
COL4A1
Collagen, type IV, alpha 1 (1666 aa)
     
 
0.552
COL24A1
Collagen, type XXIV, alpha 1 (1706 aa)
     
 
0.548
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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