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SEPSECS protein (Tursiops truncatus) - STRING interaction network
"SEPSECS" - Sep in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPSECSSep (O-phosphoserine) tRNA-Sec (selenocysteine) tRNA synthase (504 aa)    
Predicted Functional Partners:
CAD
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (2224 aa)
     
  0.979
SEPHS1
Selenophosphate synthetase 1 (392 aa)
   
 
  0.949
PSTK
phosphoseryl-tRNA kinase (350 aa)
     
 
  0.937
ZNF217
Zinc finger protein 217 (1035 aa)
     
 
  0.873
ABAT
4-aminobutyrate aminotransferase (444 aa)
   
  0.690
AGXT2L2
Alanine-glyoxylate aminotransferase 2-like 2 (450 aa)
   
  0.690
AGXT2
Alanine--glyoxylate aminotransferase 2 (502 aa)
   
  0.690
AGXT2L1
Alanine-glyoxylate aminotransferase 2-like 1 (498 aa)
   
  0.690
GTPBP2
GTP binding protein 2 (602 aa)
       
      0.660
GTPBP1
GTP binding protein 1 (669 aa)
       
      0.660
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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