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TNRC6A protein (Tursiops truncatus) - STRING interaction network
"TNRC6A" - Trinucleotide repeat containing 6A in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6ATrinucleotide repeat containing 6A (1955 aa)    
Predicted Functional Partners:
PABPC1
poly(A) binding protein, cytoplasmic 1 (620 aa)
     
 
  0.872
EIF2C1
Eukaryotic translation initiation factor 2C, 1 (854 aa)
     
  0.794
EIF2C4
Eukaryotic translation initiation factor 2C, 4 (854 aa)
     
  0.794
EIF2C2
Eukaryotic translation initiation factor 2C, 2 (852 aa)
     
  0.794
EIF2C3
Eukaryotic translation initiation factor 2C, 3 (853 aa)
     
  0.790
PABPC4
poly(A) binding protein, cytoplasmic 4 (inducible form) (555 aa)
     
 
  0.787
PABPC1L
poly(A) binding protein, cytoplasmic 1-like (585 aa)
     
 
  0.787
ENSTTRG00000013181
Annotation not available (200 aa)
     
 
  0.743
ENSTTRG00000008125
Annotation not available (532 aa)
     
 
  0.644
XRN1
5’-3’ exoribonuclease 1 (1700 aa)
     
   
  0.627
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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