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HMGB4 protein (Tursiops truncatus) - STRING interaction network
"HMGB4" - High mobility group box 4 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGB4High mobility group box 4 (185 aa)    
Predicted Functional Partners:
SUPT16H
Suppressor of Ty 16 homolog (S. cerevisiae) (1046 aa)
     
  0.828
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (1644 aa)
     
  0.745
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (1573 aa)
     
  0.745
ENSTTRG00000010712
Annotation not available (1891 aa)
     
  0.607
SSRP1
Structure specific recognition protein 1 (708 aa)
     
0.600
EHMT2
Euchromatic histone-lysine N-methyltransferase 2 (1017 aa)
     
  0.546
EHMT1
Euchromatic histone-lysine N-methyltransferase 1 (1262 aa)
     
  0.546
UMPS
Uridine monophosphate synthetase (480 aa)
     
 
  0.545
TBP
TATA box binding protein (319 aa)
     
  0.527
TBPL1
TBP-like 1 (186 aa)
     
  0.527
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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