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PCDH18 protein (Tursiops truncatus) - STRING interaction network
"PCDH18" - Protocadherin 18 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH18Protocadherin 18 (1128 aa)    
Predicted Functional Partners:
UPRT
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) (293 aa)
     
  0.630
UCKL1
Uridine-cytidine kinase 1-like 1 (542 aa)
       
  0.629
JUP
Junction plakoglobin (744 aa)
       
  0.629
CTNNB1
Catenin (cadherin-associated protein), beta 1, 88kDa (781 aa)
       
  0.629
CTNND2
Catenin (cadherin-associated protein), delta 2 (1224 aa)
     
  0.567
ARVCF
Armadillo repeat gene deleted in velocardiofacial syndrome (926 aa)
     
  0.567
PKP4
Plakophilin 4 (1192 aa)
     
  0.567
CTNND1
Catenin (cadherin-associated protein), delta 1 (964 aa)
     
  0.567
PKP1
Plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) (732 aa)
       
  0.560
PKP3
Plakophilin 3 (796 aa)
       
  0.560
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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