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SMG9 protein (Tursiops truncatus) - STRING interaction network
"SMG9" - Smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG9Smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) (491 aa)    
Predicted Functional Partners:
SMG1
Smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) (3627 aa)
     
  0.884
ENSTTRG00000017198
Annotation not available (991 aa)
     
  0.857
RBM8A
RNA binding motif protein 8A (151 aa)
       
  0.803
UPF3B
UPF3 regulator of nonsense transcripts homolog B (yeast) (477 aa)
         
  0.776
GSPT1
G1 to S phase transition 1 (707 aa)
     
 
  0.763
GSPT2
G1 to S phase transition 2 (632 aa)
     
 
  0.763
SMG5
Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (1014 aa)
     
 
  0.761
ETF1
Eukaryotic translation termination factor 1 (415 aa)
         
  0.746
SMG7
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (1171 aa)
         
  0.744
UPF1
UPF1 regulator of nonsense transcripts homolog (yeast) (1112 aa)
     
  0.731
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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