STRINGSTRING
PCM1 protein (Tursiops truncatus) - STRING interaction network
"PCM1" - Pericentriolar material 1 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCM1Pericentriolar material 1 (2063 aa)    
Predicted Functional Partners:
OFD1
Oral-facial-digital syndrome 1 (973 aa)
     
  0.773
MIB2
Mindbomb E3 ubiquitin protein ligase 2 (916 aa)
     
      0.701
MIB1
Mindbomb E3 ubiquitin protein ligase 1 (1006 aa)
     
      0.701
PCNT
Pericentrin (3018 aa)
     
  0.671
CEP135
Centrosomal protein 135kDa (1102 aa)
     
  0.661
TSGA10
Testis specific, 10 (689 aa)
     
  0.661
CEP290
Centrosomal protein 290kDa (2473 aa)
     
  0.659
RAB8A
RAB8A, member RAS oncogene family (207 aa)
     
 
  0.642
RAB8B
RAB8B, member RAS oncogene family (165 aa)
     
 
  0.642
AZI1
5-azacytidine induced 1 (1069 aa)
     
  0.632
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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