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RIMKLA protein (Tursiops truncatus) - STRING interaction network
"RIMKLA" - Ribosomal modification protein rimK-like family member A in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMKLARibosomal modification protein rimK-like family member A (336 aa)    
Predicted Functional Partners:
ACLY
ATP citrate lyase (1101 aa)
       
  0.962
FOLH1
Folate hydrolase (prostate-specific membrane antigen) 1 (579 aa)
         
  0.916
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2 (740 aa)
         
  0.916
ASPA
Aspartoacylase (313 aa)
         
  0.867
RIMKLB
Ribosomal modification protein rimK-like family member B (386 aa)
   
   
0.858
NAT8L
N-acetyltransferase 8-like (GCN5-related, putative) (134 aa)
       
  0.718
IDH3A
Isocitrate dehydrogenase 3 (NAD+) alpha (364 aa)
       
  0.676
IDH3G
Isocitrate dehydrogenase 3 (NAD+) gamma (392 aa)
       
  0.676
IDH3B
Isocitrate dehydrogenase 3 (NAD+) beta (385 aa)
       
  0.676
CS
Citrate synthase (464 aa)
       
  0.665
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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