STRINGSTRING
RNF8 protein (Tursiops truncatus) - STRING interaction network
"RNF8" - Ring finger protein 8, E3 ubiquitin protein ligase in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF8Ring finger protein 8, E3 ubiquitin protein ligase (450 aa)    
Predicted Functional Partners:
FGFR1OP2
FGFR1 oncogene partner 2 (253 aa)
     
 
  0.814
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2 (4825 aa)
     
  0.739
STRIP1
Striatin interacting protein 1 (836 aa)
     
 
  0.713
STRIP2
Striatin interacting protein 2 (836 aa)
     
 
  0.713
WDR64
WD repeat domain 64 (1077 aa)
     
 
  0.676
STRN4
Striatin, calmodulin binding protein 4 (666 aa)
     
 
  0.669
STRN
Striatin, calmodulin binding protein (701 aa)
     
 
  0.669
STRN3
Striatin, calmodulin binding protein 3 (795 aa)
     
 
  0.669
ANKRD17
Ankyrin repeat domain 17 (2578 aa)
     
    0.652
ENSTTRG00000005573
Annotation not available (2600 aa)
     
    0.652
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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