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DDX6 protein (Tursiops truncatus) - STRING interaction network
"DDX6" - DEAD in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX6DEAD (Asp-Glu-Ala-Asp) box helicase 6 (483 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3 homolog (S. cerevisiae) (506 aa)
     
  0.993
YJEFN3
YjeF N-terminal domain containing 3 (303 aa)
     
  0.976
PATL1
Protein associated with topoisomerase II homolog 1 (yeast) (655 aa)
     
  0.970
DCP1B
DCP1 decapping enzyme homolog B (S. cerevisiae) (618 aa)
     
  0.962
ENSTTRG00000008125
Annotation not available (532 aa)
     
  0.956
DCP2
DCP2 decapping enzyme homolog (S. cerevisiae) (417 aa)
     
  0.952
LSM1
LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) (133 aa)
       
  0.951
LSM7
LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (119 aa)
     
  0.940
CNOT1
CCR4-NOT transcription complex, subunit 1 (2376 aa)
     
 
  0.936
LSM6
LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) (80 aa)
     
  0.926
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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