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ATRX protein (Tursiops truncatus) - STRING interaction network
"ATRX" - Alpha thalassemia/mental retardation syndrome X-linked in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRXAlpha thalassemia/mental retardation syndrome X-linked (2518 aa)    
Predicted Functional Partners:
ASH1L
Ash1 (absent, small, or homeotic)-like (Drosophila) (2967 aa)
     
  0.883
USO1
USO1 vesicle docking protein homolog (yeast) (946 aa)
     
      0.836
TOP2A
Topoisomerase (DNA) II alpha 170kDa (1502 aa)
     
  0.834
TOP2B
Topoisomerase (DNA) II beta 180kDa (1622 aa)
     
  0.834
RNGTT
RNA guanylyltransferase and 5’-phosphatase (574 aa)
     
      0.804
PAX6
Paired box 6 (436 aa)
       
      0.797
RAD51
RAD51 homolog (S. cerevisiae) (299 aa)
   
 
  0.751
BRPF3
Bromodomain and PHD finger containing, 3 (960 aa)
     
  0.736
BRD1
Bromodomain containing 1 (1187 aa)
     
  0.736
ELAVL2
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (386 aa)
       
      0.716
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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