STRINGSTRING
DDX23 protein (Tursiops truncatus) - STRING interaction network
"DDX23" - DEAD in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (818 aa)    
Predicted Functional Partners:
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (118 aa)
     
  0.983
PRPF8
PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) (2335 aa)
     
  0.981
LSM6
LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) (80 aa)
     
  0.979
SNRPG
Small nuclear ribonucleoprotein polypeptide G (65 aa)
       
    0.963
LSM3
LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (102 aa)
       
  0.954
CHERP
Calcium homeostasis endoplasmic reticulum protein (916 aa)
     
  0.944
SNRNP200
Small nuclear ribonucleoprotein 200kDa (U5) (2135 aa)
     
  0.933
CRNKL1
Crooked neck pre-mRNA splicing factor-like 1 (Drosophila) (780 aa)
     
  0.927
SNRPN
Small nuclear ribonucleoprotein polypeptide N (271 aa)
     
  0.924
ASCC3
Activating signal cointegrator 1 complex subunit 3 (2196 aa)
     
  0.915
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
Server load: low (7%) [HD]