STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM62409.1O-acetylserine/cysteine efflux transporter. (294 aa)    
Predicted Functional Partners:
SEM62381.1
Protein of unknown function.
       0.773
SEM62355.1
LysR family transcriptional regulator, transcriptional activator AphB; Belongs to the LysR transcriptional regulatory family.
  
    0.549
SEM62432.1
Hypothetical protein.
       0.539
SEL90572.1
L-lysine exporter family protein LysE/ArgO.
  
     0.404
SEM10153.1
Threonine/homoserine/homoserine lactone efflux protein.
  
   
 0.404
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.