STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC11ATP binding cassette subfamily C member 11. (1333 aa)    
Predicted Functional Partners:
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.519
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.498
GOPC
PDZ domain-containing protein.
   
 0.443
KCNJ11
Potassium voltage-gated channel subfamily J member 11.
 
 
 0.434
KCNJ6
Potassium voltage-gated channel subfamily J member 6.
   
 0.427
KCNJ5
Potassium voltage-gated channel subfamily J member 5.
   
 0.427
KCNJ2
Potassium voltage-gated channel subfamily J member 2.
   
 0.425
KCNJ12
Uncharacterized protein.
   
 0.425
KCNJ3
Potassium voltage-gated channel subfamily J member 3.
   
 0.425
KCNJ8
Potassium voltage-gated channel subfamily J member 8.
   
 0.425
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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