Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2orf49 | DDX1 | ENSLAFP00000007694 | ENSLAFP00000001855 | Chromosome 2 open reading frame 49. | DEAD-box helicase 1. | 0.890 |
C2orf49 | DHDH | ENSLAFP00000007694 | ENSLAFP00000017031 | Chromosome 2 open reading frame 49. | Dihydrodiol dehydrogenase. | 0.534 |
C2orf49 | DHX57 | ENSLAFP00000007694 | ENSLAFP00000022428 | Chromosome 2 open reading frame 49. | DExH-box helicase 57. | 0.455 |
C2orf49 | FAM98A | ENSLAFP00000007694 | ENSLAFP00000019244 | Chromosome 2 open reading frame 49. | Family with sequence similarity 98 member A. | 0.577 |
C2orf49 | FAM98B | ENSLAFP00000007694 | ENSLAFP00000006848 | Chromosome 2 open reading frame 49. | Family with sequence similarity 98 member B. | 0.900 |
C2orf49 | MRPS11 | ENSLAFP00000007694 | ENSLAFP00000020092 | Chromosome 2 open reading frame 49. | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | 0.402 |
C2orf49 | MT-ND4 | ENSLAFP00000007694 | ENSLAFP00000029500 | Chromosome 2 open reading frame 49. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | 0.411 |
C2orf49 | RPS17 | ENSLAFP00000007694 | ENSLAFP00000019265 | Chromosome 2 open reading frame 49. | Uncharacterized protein. | 0.436 |
C2orf49 | RTCB | ENSLAFP00000007694 | ENSLAFP00000001741 | Chromosome 2 open reading frame 49. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | 0.912 |
C2orf49 | RTRAF | ENSLAFP00000007694 | ENSLAFP00000002624 | Chromosome 2 open reading frame 49. | RNA transcription, translation and transport factor. | 0.892 |
DDX1 | C2orf49 | ENSLAFP00000001855 | ENSLAFP00000007694 | DEAD-box helicase 1. | Chromosome 2 open reading frame 49. | 0.890 |
DDX1 | DHX57 | ENSLAFP00000001855 | ENSLAFP00000022428 | DEAD-box helicase 1. | DExH-box helicase 57. | 0.463 |
DDX1 | FAM98A | ENSLAFP00000001855 | ENSLAFP00000019244 | DEAD-box helicase 1. | Family with sequence similarity 98 member A. | 0.926 |
DDX1 | FAM98B | ENSLAFP00000001855 | ENSLAFP00000006848 | DEAD-box helicase 1. | Family with sequence similarity 98 member B. | 0.947 |
DDX1 | RTCB | ENSLAFP00000001855 | ENSLAFP00000001741 | DEAD-box helicase 1. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | 0.970 |
DDX1 | RTRAF | ENSLAFP00000001855 | ENSLAFP00000002624 | DEAD-box helicase 1. | RNA transcription, translation and transport factor. | 0.981 |
DHDH | C2orf49 | ENSLAFP00000017031 | ENSLAFP00000007694 | Dihydrodiol dehydrogenase. | Chromosome 2 open reading frame 49. | 0.534 |
DHX57 | C2orf49 | ENSLAFP00000022428 | ENSLAFP00000007694 | DExH-box helicase 57. | Chromosome 2 open reading frame 49. | 0.455 |
DHX57 | DDX1 | ENSLAFP00000022428 | ENSLAFP00000001855 | DExH-box helicase 57. | DEAD-box helicase 1. | 0.463 |
FAM98A | C2orf49 | ENSLAFP00000019244 | ENSLAFP00000007694 | Family with sequence similarity 98 member A. | Chromosome 2 open reading frame 49. | 0.577 |
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