STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBXTT-box transcription factor T. (435 aa)    
Predicted Functional Partners:
MGA
MAX dimerization protein MGA.
 
 
    0.738
NOTO
Notochord homeobox.
    
 0.513
EOMES
Eomesodermin.
   
 
0.509
RIN3
Ras and Rab interactor 3.
      
 0.497
BMP4
Bone morphogenetic protein 4.
     
 0.468
BMP2
Bone morphogenetic protein 2.
     
 0.468
FOXH1
Forkhead box H1.
   
 
 0.460
RTL4
Retrotransposon Gag like 4.
    
 
 0.458
TBR1
T-box brain transcription factor 1.
   
 
0.449
SNAI1
Snail family transcriptional repressor 1.
    
 0.446
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.