STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFPM1Zinc finger protein, FOG family member 1. (760 aa)    
Predicted Functional Partners:
GATA1
GATA binding protein 1.
   
 0.938
GATA2
GATA binding protein 2.
    
 0.850
LMO2
LIM domain only 2.
   
 
 0.689
GATA4
GATA binding protein 4.
   
 0.684
GATA3
GATA binding protein 3.
    
 0.666
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.645
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.645
GATA6
Uncharacterized protein.
   
 0.631
LDB1
LIM domain binding 1.
    
 
 0.630
GATA5
GATA binding protein 5.
   
 0.608
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.