STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB16Zinc finger and BTB domain containing 16. (673 aa)    
Predicted Functional Partners:
RARA
Retinoic acid receptor alpha.
    
 0.924
NCOR2
Nuclear receptor corepressor 2.
    
 0.768
NCOR1
Nuclear receptor corepressor 1.
    
 0.749
RNASEH2A
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.723
HTR5A
5-hydroxytryptamine receptor 5A.
      
 0.717
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.702
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.652
DDX4
DEAD-box helicase 4; Belongs to the DEAD box helicase family.
   
 
 0.632
DAZL
RRM domain-containing protein.
   
 
 0.609
G3THQ5_LOXAF
RING-type domain-containing protein.
    
 0.592
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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