STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC17Zinc finger CCHC-type containing 17. (244 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
  0.761
G3U095_LOXAF
Uncharacterized protein.
   
  0.761
UTP3
UTP3 small subunit processome component.
   
 0.755
SLU7
SLU7 homolog, splicing factor.
   
 0.753
UTP18
UTP18 small subunit processome component.
   
 0.738
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.738
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.738
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.738
SF3B4
Splicing factor 3b subunit 4.
   
 0.735
NOL6
Nucleolar protein 6.
   
 0.728
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.