STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC1Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 
 0.767
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
    
 0.727
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
   
  
 0.590
SURF6
Surfeit 6.
      
 0.568
AK8
Adenylate kinase 8; Belongs to the adenylate kinase family.
   
  
 0.498
OLFM1
Olfactomedin 1.
      
 0.485
VAV2
Vav guanine nucleotide exchange factor 2.
      
 0.469
KCNT1
Potassium sodium-activated channel subfamily T member 1.
      
 0.464
UBL7
Ubiquitin like 7.
    
 0.438
CEL
Carboxyl ester lipase; Belongs to the type-B carboxylesterase/lipase family.
      
 0.418
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.