STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A11Solute carrier family 7 member 11. (503 aa)    
Predicted Functional Partners:
SLC3A2
Solute carrier family 3 member 2.
   
 0.998
CD44
CD44 molecule (Indian blood group).
    
 
 0.775
SLC3A1
Solute carrier family 3 member 1.
   
 0.702
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.601
KIAA0513
KIAA0513.
   
 0.601
OTUB1
Ubiquitin thioesterase.
    
 
 0.510
LOC100661620
Alpha-amylase.
   
 0.405
LOC100661902
Alpha-amylase.
   
 0.405
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.