STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTBK1Tau tubulin kinase 1. (1261 aa)    
Predicted Functional Partners:
LTV1
Uncharacterized protein.
    
 0.760
BYSL
Bystin like.
    
 0.690
RIOK2
RIO kinase 2.
    
 0.678
TSR1
Bms1-type G domain-containing protein.
    
 0.625
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.592
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.553
PER3
Period circadian regulator 3.
    
 0.501
PER2
Period circadian regulator 2.
    
 0.501
PER1
Period circadian regulator 1.
    
 0.501
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.