STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UC47_LOXAFUncharacterized protein. (201 aa)    
Predicted Functional Partners:
CCPG1
Cell cycle progression 1.
 
     0.934
G3UGU2_LOXAF
ATG11 domain-containing protein.
   
 0.705
RB1CC1
ATG11 domain-containing protein.
   
 0.705
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
RANBP2
RAN binding protein 2.
    
 0.481
KDM6A
Lysine demethylase 6A.
   
 0.441
SEC62
SEC62 homolog, preprotein translocation factor.
   
 
 0.415
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.412
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.405
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.