STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX52DExD-box helicase 52. (578 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
 0.998
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.996
PDCD11
Programmed cell death 11.
   
 0.995
NOP14
NOP14 nucleolar protein.
   
 
 0.992
WDR46
WD repeat domain 46.
   
 
 0.988
DCAF13
DDB1 and CUL4 associated factor 13.
   
 0.986
DDX47
DEAD-box helicase 47; Belongs to the DEAD box helicase family.
  
0.985
NOL6
Nucleolar protein 6.
   
 0.984
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
  
0.980
UTP20
UTP20 small subunit processome component.
   
 
 0.979
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.