STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_04013Unannotated protein. (462 aa)    
Predicted Functional Partners:
GCA_000515335_04015
Unannotated protein.
 
  0.917
GCA_000515335_04016
Unannotated protein.
 
  0.915
GCA_000515335_04020
Unannotated protein.
 
  0.910
GCA_000515335_04018
Unannotated protein.
 
    0.895
GCA_000515335_04021
Unannotated protein.
 
  0.895
GCA_000515335_04017
Unannotated protein.
 
    0.894
GCA_000515335_04014
Unannotated protein.
 
     0.892
GCA_000515335_04019
Unannotated protein.
 
     0.872
GCA_000515335_02475
Unannotated protein.
  
     0.772
GCA_000515335_04011
Unannotated protein.
  
     0.767
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.