STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTES_0665Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (344 aa)    
Predicted Functional Partners:
MTES_0667
ABC-type sugar transport system, periplasmic component.
 
 0.974
MTES_0666
ABC-type sugar transport system, ATPase component.
 
 0.963
MTES_2058
ABC-type sugar transport system, ATPase component.
 0.963
MTES_0655
ABC-type sugar transport system, periplasmic component.
 
 0.952
MTES_2057
ABC-type sugar transport system, periplasmic component.
 
 0.925
MTES_2059
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
  
 
0.923
MTES_0656
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
  
 
0.918
rbsA
ABC-type sugar transport system, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.842
MTES_0654
ABC-type sugar transport system, ATPase component.
 
 0.834
MTES_2140
ABC-type sugar transport system, ATPase component.
 
 0.833
Your Current Organism:
Microbacterium testaceum
NCBI taxonomy Id: 979556
Other names: M. testaceum StLB037, Microbacterium testaceum StLB037, Microbacterium testaceum str. StLB037, Microbacterium testaceum strain StLB037
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