STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTES_0687Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (739 aa)    
Predicted Functional Partners:
acnA
Aconitase A; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.962
kgd
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component.
   
 
 0.940
gltB
Glutamate synthase domain 2.
     
 0.936
ldh
Malate/lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
  
 0.893
purB
Adenylosuccinate lyase.
   
  0.826
argH
Argininosuccinate lyase.
    
 0.811
gltD
NADPH-dependent glutamate synthase beta chain.
   
 
 0.807
gabD
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.805
MTES_2461
NAD-dependent aldehyde dehydrogenase.
   
 
  0.805
MTES_3060
Aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
  0.805
Your Current Organism:
Microbacterium testaceum
NCBI taxonomy Id: 979556
Other names: M. testaceum StLB037, Microbacterium testaceum StLB037, Microbacterium testaceum str. StLB037, Microbacterium testaceum strain StLB037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.