STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM178ATransmembrane protein 178A. (297 aa)    
Predicted Functional Partners:
PTCHD4
Patched domain containing 4.
   
  
 0.858
TMEM94
Transmembrane protein 94.
      
 0.841
TMEM88
Transmembrane protein 88.
      
 0.720
CHRDL2
Chordin like 2.
      
 0.692
NICN1
Uncharacterized protein.
      
 0.660
GALM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
      
 0.640
TMEM204
Transmembrane protein 204.
   
  
 0.585
MYPN
Myopalladin.
      
 0.575
SLC4A11
Solute carrier family 4 member 11.
      
 0.565
AMDHD1
Amidohydrolase domain containing 1.
      
 0.536
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.