Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFF1 | AFF4 | ENSECAP00000041967 | ENSECAP00000010038 | AF4/FMR2 family member 1. | AF4/FMR2 family member 4. | 0.889 |
AFF1 | BRD4 | ENSECAP00000041967 | ENSECAP00000019958 | AF4/FMR2 family member 1. | Bromodomain containing 4. | 0.692 |
AFF1 | CCNT1 | ENSECAP00000041967 | ENSECAP00000013646 | AF4/FMR2 family member 1. | Cyclin-T1; Regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin-T1) complex, also called positive transcription elongation factor B (P-TEFb), which is proposed to facilitate the transition from abortive to production elongation by phosphorylating the CTD (C- terminal domain) of the large subunit of RNA polymerase II (RNAP II) (By similarity). In case of equine infectious anemia virus (EIAV) infection, binds to the nuclear transcriptional activator Tat, increasing Tat's affinity for the transactivating response RNA element (TAR RNA). Serves as an essential cofactor for Ta [...] | 0.976 |
AFF1 | CCNT2 | ENSECAP00000041967 | ENSECAP00000044676 | AF4/FMR2 family member 1. | Cyclin T2; Belongs to the cyclin family. | 0.939 |
AFF1 | CDK9 | ENSECAP00000041967 | ENSECAP00000036625 | AF4/FMR2 family member 1. | Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. | 0.985 |
AFF1 | ELL2 | ENSECAP00000041967 | ENSECAP00000020537 | AF4/FMR2 family member 1. | Elongation factor for RNA polymerase II 2. | 0.985 |
AFF1 | HEXIM1 | ENSECAP00000041967 | ENSECAP00000000545 | AF4/FMR2 family member 1. | HEXIM P-TEFb complex subunit 1. | 0.793 |
AFF1 | HEXIM2 | ENSECAP00000041967 | ENSECAP00000015902 | AF4/FMR2 family member 1. | HEXIM P-TEFb complex subunit 2. | 0.676 |
AFF1 | LARP7 | ENSECAP00000041967 | ENSECAP00000001273 | AF4/FMR2 family member 1. | La ribonucleoprotein domain family member 7. | 0.783 |
AFF4 | AFF1 | ENSECAP00000010038 | ENSECAP00000041967 | AF4/FMR2 family member 4. | AF4/FMR2 family member 1. | 0.889 |
AFF4 | BRD4 | ENSECAP00000010038 | ENSECAP00000019958 | AF4/FMR2 family member 4. | Bromodomain containing 4. | 0.702 |
AFF4 | CCNT1 | ENSECAP00000010038 | ENSECAP00000013646 | AF4/FMR2 family member 4. | Cyclin-T1; Regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin-T1) complex, also called positive transcription elongation factor B (P-TEFb), which is proposed to facilitate the transition from abortive to production elongation by phosphorylating the CTD (C- terminal domain) of the large subunit of RNA polymerase II (RNAP II) (By similarity). In case of equine infectious anemia virus (EIAV) infection, binds to the nuclear transcriptional activator Tat, increasing Tat's affinity for the transactivating response RNA element (TAR RNA). Serves as an essential cofactor for Ta [...] | 0.998 |
AFF4 | CCNT2 | ENSECAP00000010038 | ENSECAP00000044676 | AF4/FMR2 family member 4. | Cyclin T2; Belongs to the cyclin family. | 0.965 |
AFF4 | CDK9 | ENSECAP00000010038 | ENSECAP00000036625 | AF4/FMR2 family member 4. | Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. | 0.998 |
AFF4 | ELL2 | ENSECAP00000010038 | ENSECAP00000020537 | AF4/FMR2 family member 4. | Elongation factor for RNA polymerase II 2. | 0.999 |
AFF4 | HEXIM1 | ENSECAP00000010038 | ENSECAP00000000545 | AF4/FMR2 family member 4. | HEXIM P-TEFb complex subunit 1. | 0.878 |
AFF4 | HEXIM2 | ENSECAP00000010038 | ENSECAP00000015902 | AF4/FMR2 family member 4. | HEXIM P-TEFb complex subunit 2. | 0.691 |
AFF4 | LARP7 | ENSECAP00000010038 | ENSECAP00000001273 | AF4/FMR2 family member 4. | La ribonucleoprotein domain family member 7. | 0.866 |
BRD4 | AFF1 | ENSECAP00000019958 | ENSECAP00000041967 | Bromodomain containing 4. | AF4/FMR2 family member 1. | 0.692 |
BRD4 | AFF4 | ENSECAP00000019958 | ENSECAP00000010038 | Bromodomain containing 4. | AF4/FMR2 family member 4. | 0.702 |
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