STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMB2Laminin subunit beta 2. (1801 aa)    
Predicted Functional Partners:
LAMA5
Laminin subunit alpha 5.
   
0.860
LAMA2
Laminin subunit alpha 2.
   
0.853
LAMA3
Laminin subunit alpha 3.
   
0.843
SGCA
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.840
PELO
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.826
LAMC1
Laminin subunit gamma 1.
   
0.821
LAMC3
Laminin subunit gamma 3.
   
0.819
ITGB4
Integrin beta.
   
 0.818
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.795
LAMC2
Laminin subunit gamma-2; Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components. Ladsin exerts cell-scattering activity toward a wide variety of cells, including epithelial, endothelial, and fibroblastic cells.
   
0.793
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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