STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM3Transglutaminase 3. (694 aa)    
Predicted Functional Partners:
SALL4
Spalt like transcription factor 4.
      
 0.751
PDCD5
Programmed cell death 5.
      
 0.691
SEMA3B
Semaphorin 3B; Belongs to the semaphorin family.
      
 0.690
KCNMB1
Potassium calcium-activated channel subfamily M regulatory beta subunit 1.
   
  
 0.690
UVRAG
UV radiation resistance associated.
      
 0.689
CDSN
Corneodesmosin.
   
  
 0.641
SPRR4
Small proline rich protein 4.
      
 0.635
BCAR3
BCAR3 adaptor protein, NSP family member.
    
 
 0.592
KLK14
Kallikrein related peptidase 14; Belongs to the peptidase S1 family.
   
 
 0.562
CNFN
Cornifelin.
   
  
 0.519
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.