STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM20LTranslocase of outer mitochondrial membrane 20 like. (167 aa)    
Predicted Functional Partners:
TOMM22
Translocase of outer mitochondrial membrane 22.
   
 0.929
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 0.924
TOMM40
Translocase of outer mitochondrial membrane 40.
   
 0.921
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.902
TOMM70
Translocase of outer mitochondrial membrane 70.
   
 0.881
TOMM5
Uncharacterized protein.
   
 
 0.765
TOMM6
Translocase of outer mitochondrial membrane 6.
   
 
 0.758
VDAC1
Voltage dependent anion channel 1.
   
 0.755
SAMM50
SAMM50 sorting and assembly machinery component.
    
 0.750
CAST
Calpastatin.
      
 0.732
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.