STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100064378Ribosomal_L18e/L15P domain-containing protein. (177 aa)    
Predicted Functional Partners:
F7BVE8_HORSE
Ubiquitin-like domain-containing protein.
   
 0.991
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
ENSECAP00000029452
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
ENSECAP00000031221
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
ENSECAP00000033963
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
ENSECAP00000039190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
RPL4
Ribosomal protein L4.
  
 0.976
RPS19
Ribosomal protein S19.
   
 
 0.962
RPL5
Ribosomal protein L5.
  
 0.954
RPL8
Ribosomal protein L8.
   
 0.953
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.