STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DSR2RING-type domain-containing protein. (1138 aa)    
Predicted Functional Partners:
A0A2V1DVI3
FACT complex subunit spt16.
    
 
 0.834
A0A2V1DAC2
Polyubiquitin.
    
 0.749
A0A2V1DH22
Kinase-like protein.
    
 0.749
A0A2V1D8K2
Ubiquitin-domain-containing protein.
    
  0.681
A0A2V1DC46
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.681
A0A2V1DVV7
CIA30-domain-containing protein.
    
  0.681
A0A2V1ED34
BZIP domain-containing protein.
    
  0.681
A0A2V1E7Z9
Phosphodiesterase.
    
 0.661
A0A2V1DUK4
Phosphatase tensin-type domain-containing protein.
    
  0.653
A0A2V1D7Y9
Histone H3; Belongs to the histone H3 family.
    
 0.635
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.