STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1EAI9TPR-like protein. (679 aa)    
Predicted Functional Partners:
A0A2V1DAC1
Cell cycle control protein cwf14.
    
 0.999
A0A2V1DFX9
Pre-mRNA-splicing factor syf1.
   
0.999
A0A2V1DHD7
Pre-mRNA-processing protein 45.
  
 0.999
A0A2V1E6F9
RRM domain-containing protein.
   
 0.999
A0A2V1E6K2
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.999
A0A2V1EAP1
Isy1-like splicing factor.
   
 0.999
A0A2V1DJ32
RNA-binding domain-containing protein.
   
 0.998
A0A2V1DVT0
SYF2-domain-containing protein.
    
 0.996
A0A2V1DC84
Uncharacterized protein.
   
 
 0.991
A0A2V1E8X7
Pre-mRNA-splicing factor SLU7.
   
 
 0.989
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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