STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_012039BHLH domain-containing protein. (195 aa)    
Predicted Functional Partners:
L484_019453
DNA repair protein XRCC1.
   
 0.995
L484_016364
DNA repair protein XRCC4.
    
 
 0.961
L484_016455
Histidinol-phosphate aminotransferase.
  
 
 0.957
L484_008077
Imidazole glycerol phosphate synthase hisHF; Belongs to the HisA/HisF family.
  
 
 0.946
L484_023473
Bifunctional fucokinase/fucose pyrophosphorylase.
  
 
 0.944
L484_027112
DNA ligase.
  
 0.907
L484_005197
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
   
 0.892
L484_005196
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
   
 0.892
L484_014813
Tyrosyl-DNA phosphodiesterase 1.
    
 
 0.884
L484_010354
Histidine biosynthesis bifunctional protein hisIE.
  
 
 0.877
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.